- Scientific Name
- Falco cherrug
- Common Names
- Saker falcon;
- Bioproject
- PRJCA010321
- Biosample
- SAMC912055
- Accession No.
- GWHBOUP00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR575667
- GVM variations of the species
- -
- Submitter Organization
- Key Laboratory of Animal Ecology and Conservation Biology, CAS, Institute of Zoology, Chinese Academy of Sciences
- Contact
- Shengkai Pan, pansk@ioz.ac.cn
- Sequence author(s)
- Li Hu, Shengkai Pan, Xiangjiang Zhan
- Released Date
- 2022-10-08
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg2 version 1.2.8
Pilon version 1.22
Solve version 3.1
LACHESIS 2017-12 - Sequencing & coverage
- PacBio 79.0
Illumina HiSeq 2000 73.0
Hi-C 195.0 - Download
- DNA
- Publication(s)
- Li Hu, et al. Supplementary Information for Arctic introgression and chromatin regulation facilitated rapid Qinghai-Tibet Plateau colonization by an avian predator. Nature communications. 2022.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBOUP00000000 | - | saker falcon chromosomal level genome | Draft genome in chromosome level | 2022-10-08 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,235,145,180 |
| GC content | 42.60% |
| Chromosomes sequence No. | 26 |
| Genome sequence No. | 1,002 |
| Maximum genome sequence length (bp) | 128,708,988 |
| Minimum genome sequence length (bp) | 3,868 |
| Average genome sequence length (bp) | 1,232,680 |
| Genome sequence N50 (bp) | 92,336,655 |
| Genome sequence N90 (bp) | 25,156,918 |